This is a report summarizing your results.
Here you can see which parts of your query sequence we found covered by experimentally resolved structures (in blue) and covered by models (in orange). If you have introduced your own structures or models, wou yill find them here too.
Flexibility is an important feature of proteins, since they need to move to perform their function and interact with their substrates. In the following section, we provide you with two types of flexibility prediction: the Dynamic Flexibility Index and Hinge Prediction.
Dynamic Flexibility Index
This is per-residue index indicating the contribution of each residue to the overall flexibility of the protein. It uses a method based in an Elastic Network Model, which is a more lightweight (but less precise, obviously) alternative to Molecular Dynamics. for ore info, here is the original paper.
Hinge Prediction
Hinges are the regions of the protein that allow it to move and change conformations. Using this tool the predicted hinge regions are showed on top of the DFI plot, with the significative ones colored in green, and the non-significative ones in red.
The program automatically generates a composite of the structures found, and an IMP topology file correspoding to it. In the figure below, the selected structures are represented in the positions they provide structure for.
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['5lg4_B', 'SEC3_AF_A2_AF', 'SEC3_AF_A8_AF', 'SEC3_AF_A7_AF', '5yfp_A', 'SEC3_AF_A1_AF', 'SEC3_AF_A6_AF', 'SEC3_AF_10_AF', 'SEC3_AF_A9_AF', 'SEC3_AF_A4_AF', 'SEC3_AF_A3_AF', 'SEC3_AF_A5_AF']